STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HINFPHistone H4 transcription factor. (518 aa)    
Predicted Functional Partners:
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.880
GSC
Goosecoid homeobox.
    
   0.806
ZNF318
Zinc finger protein 318.
      
 0.650
SDK1
Sidekick cell adhesion molecule 1.
      
 0.596
E2F7
E2F transcription factor 7.
      
 0.583
DCTN2
Dynactin subunit 2.
      
 0.568
G1L7J0_AILME
Uncharacterized protein.
      
 0.564
SDK2
Uncharacterized protein.
      
 0.564
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
      
 0.550
POU2F1
POU domain protein.
      
 0.526
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.