STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHDC4KH domain containing 4, pre-mRNA splicing factor. (614 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
  
 0.754
PUF60
Poly(U) binding splicing factor 60.
    
 
 0.747
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.740
LMF1
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
      
 0.707
FUBP3
Far upstream element binding protein 3.
      
 0.602
LUC7L
LUC7 like.
   
  
 0.569
FMC1-LUC7L2
FMC1-LUC7L2 readthrough.
   
  
 0.569
G1LU40_AILME
Uncharacterized protein.
      
 0.549
INCENP
Inner centromere protein.
      
 0.543
CDC5L
Cell division cycle 5 like.
    
 
 0.517
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.