STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASH1LASH1 like histone lysine methyltransferase. (2970 aa)    
Predicted Functional Partners:
MORF4L1
Mortality factor 4 like 1.
   
 
 0.987
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
 
 0.915
ZC3H11A
Uncharacterized protein.
   
  
 0.838
BPTF
Bromodomain PHD finger transcription factor.
   
 
0.771
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
  
0.761
G1MDY4_AILME
Uncharacterized protein.
   
  
 0.761
PKP3
Plakophilin 3.
      
 0.757
ARID4B
AT-rich interaction domain 4B.
   
 
 0.744
AQP10
Aquaporin 10; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.732
MED13L
Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
  
 0.708
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.