STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK2Uroplakin 2. (184 aa)    
Predicted Functional Partners:
UPK1A
Tetraspanin.
  
 
 0.950
UPK1B
Tetraspanin.
  
 
 0.883
UPK3A
Uroplakin 3A.
   
  
 0.743
RBP5
Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 
 0.736
FOXR1
Forkhead box R1.
      
 0.607
FOXR2
Forkhead box R2.
      
 0.607
SLC37A4
Solute carrier family 37 member 4.
      
 0.602
RNF26
Ring finger protein 26.
    
 
 0.589
UPK3B
Uroplakin 3B.
      
 0.571
KRT20
Keratin 20; Belongs to the intermediate filament family.
    
 0.562
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.