STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL4AUbiquitin like 4A. (179 aa)    
Predicted Functional Partners:
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.942
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.909
NBR1
NBR1 autophagy cargo receptor.
   
 0.884
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.866
UBXN7
UBX domain-containing protein 7.
    
 0.836
TRAF7
TNF receptor associated factor 7.
   
 0.811
BAG6
BCL2 associated athanogene 6.
    
 0.793
SGTA
Small glutamine rich tetratricopeptide repeat containing alpha.
   
 0.785
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.779
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.772
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.