STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC141Coiled-coil domain containing 141. (655 aa)    
Predicted Functional Partners:
CER1
Cerberus 1, DAN family BMP antagonist.
   
  
 0.753
LGI2
Leucine rich repeat LGI family member 2.
    
 0.717
WDR18
WD repeat domain 18.
   
 0.643
UNC45B
Unc-45 myosin chaperone B.
   
 
 0.630
FNDC4
Fibronectin type III domain containing 4.
      
 0.617
EFCAB11
EF-hand calcium binding domain 11.
    
 0.600
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 0.582
TEX10
Testis expressed 10.
   
 0.572
AOPEP
Aminopeptidase O (putative).
      
 0.556
TNC
Tenascin C.
    
 0.548
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.