Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AICDA | BCL6 | ENSAMEP00000007460 | ENSAMEP00000000860 | Activation induced cytidine deaminase. | BCL6 transcription repressor. | 0.923 |
AICDA | CD4 | ENSAMEP00000007460 | ENSAMEP00000014814 | Activation induced cytidine deaminase. | Ig-like domain-containing protein. | 0.759 |
AICDA | CD44 | ENSAMEP00000007460 | ENSAMEP00000008380 | Activation induced cytidine deaminase. | CD44 molecule (Indian blood group). | 0.435 |
AICDA | CXCR5 | ENSAMEP00000007460 | ENSAMEP00000000056 | Activation induced cytidine deaminase. | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.526 |
AICDA | IL21R | ENSAMEP00000007460 | ENSAMEP00000011755 | Activation induced cytidine deaminase. | Interleukin 21 receptor. | 0.630 |
BCL6 | AICDA | ENSAMEP00000000860 | ENSAMEP00000007460 | BCL6 transcription repressor. | Activation induced cytidine deaminase. | 0.923 |
BCL6 | BCOR | ENSAMEP00000000860 | ENSAMEP00000007412 | BCL6 transcription repressor. | BCL6 corepressor. | 0.914 |
BCL6 | CD4 | ENSAMEP00000000860 | ENSAMEP00000014814 | BCL6 transcription repressor. | Ig-like domain-containing protein. | 0.925 |
BCL6 | CD44 | ENSAMEP00000000860 | ENSAMEP00000008380 | BCL6 transcription repressor. | CD44 molecule (Indian blood group). | 0.836 |
BCL6 | CXCR5 | ENSAMEP00000000860 | ENSAMEP00000000056 | BCL6 transcription repressor. | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.896 |
BCL6 | FOXP3 | ENSAMEP00000000860 | ENSAMEP00000012776 | BCL6 transcription repressor. | Forkhead box P3. | 0.795 |
BCL6 | ICOS | ENSAMEP00000000860 | ENSAMEP00000003084 | BCL6 transcription repressor. | Inducible T cell costimulator. | 0.947 |
BCL6 | IL21R | ENSAMEP00000000860 | ENSAMEP00000011755 | BCL6 transcription repressor. | Interleukin 21 receptor. | 0.857 |
BCL6 | NCOR1 | ENSAMEP00000000860 | ENSAMEP00000004955 | BCL6 transcription repressor. | Nuclear receptor corepressor 1. | 0.925 |
BCL6 | NCOR2 | ENSAMEP00000000860 | ENSAMEP00000016359 | BCL6 transcription repressor. | Nuclear receptor corepressor 2. | 0.931 |
BCOR | BCL6 | ENSAMEP00000007412 | ENSAMEP00000000860 | BCL6 corepressor. | BCL6 transcription repressor. | 0.914 |
BCOR | NCOR1 | ENSAMEP00000007412 | ENSAMEP00000004955 | BCL6 corepressor. | Nuclear receptor corepressor 1. | 0.425 |
CD4 | AICDA | ENSAMEP00000014814 | ENSAMEP00000007460 | Ig-like domain-containing protein. | Activation induced cytidine deaminase. | 0.759 |
CD4 | BCL6 | ENSAMEP00000014814 | ENSAMEP00000000860 | Ig-like domain-containing protein. | BCL6 transcription repressor. | 0.925 |
CD4 | CD44 | ENSAMEP00000014814 | ENSAMEP00000008380 | Ig-like domain-containing protein. | CD44 molecule (Indian blood group). | 0.961 |
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