Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C1orf56Chromosome 1 open reading frame 56. (333 aa)    
Predicted Functional Partners:
ACSBG2
Acyl-CoA synthetase bubblegum family member 2.
   
 0.664
G1LJW3_AILME
AMP-binding domain-containing protein.
   
 0.664
G1LK82_AILME
Uncharacterized protein; Belongs to the adenylate kinase family.
    
 
 0.581
CCIN
Calicin.
   
   0.509
SPESP1
Sperm equatorial segment protein 1.
   
  
 0.485
G1LFM1_AILME
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.457
G1LFP6_AILME
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.457
PSMA3
Proteasome subunit alpha type.
    
 
 0.421
SPACA1
Sperm acrosome associated 1.
   
  
 0.409
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
    
 
 0.408
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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