STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEZ1Fasciculation and elongation protein zeta 1. (392 aa)    
Predicted Functional Partners:
RIMS3
Regulating synaptic membrane exocytosis 3.
   
  
 0.751
DISC1
Uncharacterized protein.
    
 
 0.689
PANDA_005334
Uncharacterized protein.
    
 
 0.689
ERBIN
Erbb2 interacting protein.
      
 0.675
ULK3
Unc-51 like kinase 3.
    
 
 0.629
SCOC
Uncharacterized protein.
   
 
 0.623
G1M2M9_AILME
Uncharacterized protein.
   
 
 0.623
ATXN7L3
Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...]
      
 0.622
NDEL1
NudE neurodevelopment protein 1 like 1.
      
 0.595
LSM10
LSM10, U7 small nuclear RNA associated.
   
  
 0.576
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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