STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS8Galectin. (358 aa)    
Predicted Functional Partners:
CALCOCO2
Calcium binding and coiled-coil domain 2.
    
 
 0.934
G1LB08_AILME
Uncharacterized protein.
   
 
 0.647
TAX1BP1
Ubiquitin-like domain-containing protein.
   
 
 0.647
G1MP99_AILME
Uncharacterized protein.
    
 0.568
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 
 0.557
G1LCD8_AILME
Uncharacterized protein.
    
 
 0.553
TBC1D25
TBC1 domain family member 25.
   
  
 0.538
TDG
Thymine DNA glycosylase.
   
  
 0.534
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
   
  
 0.532
METAP1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
      
 0.527
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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