Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT2Scm like with four mbt domains 2. (916 aa)    
Predicted Functional Partners:
SFMBT1
Scm like with four mbt domains 1.
   
 
  0.908
SLC38A4
Solute carrier family 38 member 4.
      
 0.758
SMOC1
SPARC related modular calcium binding 1.
      
 0.645
JADE1
Jade family PHD finger 1.
      
 0.630
YAF2
YY1 associated factor 2.
    
 0.611
RYBP
RING1 and YY1 binding protein.
    
 0.611
GATM
Glycine amidinotransferase.
    
 0.575
UBE2O
Ubiquitin conjugating enzyme E2 O.
   
 0.548
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.532
EED
Embryonic ectoderm development.
   
 0.511
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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