Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL7A1Uncharacterized protein. (2947 aa)    
Predicted Functional Partners:
COL4A2
Collagen type IV alpha 2 chain.
   
 0.775
COL4A4
Collagen type IV alpha 4 chain.
   
 
 0.770
COL4A1
Collagen type IV alpha 1 chain.
   
 
 0.726
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 0.642
LAMC2
Laminin subunit gamma 2.
   
 0.592
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.587
C2CD3
C2 domain containing 3 centriole elongation regulator.
      
 0.568
LAMB3
Laminin subunit beta 3.
   
 0.568
CENPF
Centromere protein F.
   
  
 0.559
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.550
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.