STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (270 aa)    
Predicted Functional Partners:
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
  
 0.954
CAPN14
Calpain 14; Belongs to the peptidase C2 family.
   
0.896
CAPN1
Calpain 1; Belongs to the peptidase C2 family.
   
0.896
CAPN5
Calpain 5; Belongs to the peptidase C2 family.
 
 
 0.879
CAST
Calpastatin.
   
 0.868
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
 
 
 0.783
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
   
 0.766
CAPN13
Calpain 13; Belongs to the peptidase C2 family.
   
0.763
TMEM259
Transmembrane protein 259.
   
  
 0.753
CACHD1
Cache domain containing 1.
      
 0.750
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.