STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD11Ankyrin repeat domain 11. (2641 aa)    
Predicted Functional Partners:
SON
SON DNA binding protein.
   
  0.993
STAG2
Stromal antigen 2.
   
 0.796
DLGAP2
DLG associated protein 2.
   
 0.657
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.649
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.606
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 
 0.602
G1LJT8_AILME
B box-type domain-containing protein.
    
 0.580
TRIM26
Tripartite motif containing 26.
    
 0.580
TRIM10
Tripartite motif containing 10.
    
 0.579
NCOR1
Nuclear receptor corepressor 1.
   
 0.574
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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