STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD2FYVE, RhoGEF and PH domain containing 2. (657 aa)    
Predicted Functional Partners:
GPSM3
G protein signaling modulator 3.
   
  
 0.721
TCF19
Transcription factor 19.
   
  
 0.619
C6orf15
Chromosome 6 open reading frame 15.
      
 0.607
ANKLE1
Ankyrin repeat and LEM domain containing 1.
      
 0.499
LTB
Lymphotoxin beta; Belongs to the tumor necrosis factor family.
   
  
 0.487
RHOV
Ras homolog family member V.
   
 0.476
G1L6G4_AILME
Uncharacterized protein.
      
 0.469
KCNT2
Potassium sodium-activated channel subfamily T member 2.
      
 0.457
LRP8
LDL receptor related protein 8.
      
 0.453
FAM184B
Family with sequence similarity 184 member B.
      
 0.414
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.