Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEMD2LEM domain containing 2. (289 aa)    
Predicted Functional Partners:
CHMP7
Charged multivesicular body protein 7.
     
 0.857
RRBP1
Ribosome binding protein 1.
   
 0.800
IST1
IST1 factor associated with ESCRT-III.
    
 0.766
BANF1
Barrier to autointegration factor 1.
    
 0.766
SLC35A2
Solute carrier family 35 member A2.
      
 0.699
EMD
Emerin.
   
 0.694
ZDHHC6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.643
ANKLE2
Ankyrin repeat and LEM domain containing 2.
    
 0.616
SUN2
Sad1 and UNC84 domain containing 2.
   
 0.607
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.606
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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