STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDCA8Cell division cycle associated 8. (276 aa)    
Predicted Functional Partners:
AURKB
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.999
BIRC5
Baculoviral IAP repeat containing 5.
   
 0.999
INCENP
Inner centromere protein.
   
 0.999
BUB1B
BUB1 N-terminal domain-containing protein.
   
 
 0.990
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.988
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.983
ATP5PD
ATP synthase peripheral stalk subunit d.
   
 0.983
ATP5PO
Uncharacterized protein.
  
 0.983
ATP5F1C
ATP synthase subunit gamma.
  
 0.976
ATP5F1D
ATP synthase F1 subunit delta.
  
 0.975
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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