Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis associated 16. (367 aa)    
Predicted Functional Partners:
RNF17
Ring finger protein 17.
   
  
 0.751
CCDC62
Coiled-coil domain containing 62.
      
 0.735
PICK1
Protein interacting with PRKCA 1.
      
 0.722
SPATA9
Spermatogenesis associated 9.
      
 0.714
SPEM1
Spermatid maturation 1.
      
 0.698
ZPBP
Zona pellucida binding protein.
   
  
 0.690
C9orf131
Chromosome 9 open reading frame 131.
      
 0.687
AURKC
Aurora kinase C; Belongs to the protein kinase superfamily.
      
 0.658
SPACA1
Sperm acrosome associated 1.
      
 0.641
SPATA46
Spermatogenesis associated 46.
   
  
 0.605
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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