LOC100479931 protein (Ailuropoda melanoleuca)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC100479931

Uncharacterized protein. (158 aa)

Predicted Functional Partners:

SELL

0.927

G1LGP8_AILME

0.877

CSN2

0.846

LALBA

0.830

G1LGV4_AILME

0.604

CD34

0.603

SELE

0.576

SELP

0.576

LOC100464677

0.564

EMCN

0.557

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD34	EMCN	ENSAMEP00000008666	ENSAMEP00000009221	CD34 molecule.	Uncharacterized protein.	0.639
CD34	G1LGV4_AILME	ENSAMEP00000008666	ENSAMEP00000006144	CD34 molecule.	Podocalyxin; Involved in the regulation of both adhesion and cell morphology and cancer progression. Function as an anti-adhesive molecule that maintains an open filtration pathway between neighboring foot processes in the podocyte by charge repulsion. Belongs to the podocalyxin family.	0.434
CD34	LOC100479931	ENSAMEP00000008666	ENSAMEP00000001155	CD34 molecule.	Uncharacterized protein.	0.603
CD34	SELE	ENSAMEP00000008666	ENSAMEP00000011886	CD34 molecule.	Selectin E.	0.754
CD34	SELL	ENSAMEP00000008666	ENSAMEP00000011908	CD34 molecule.	Selectin L.	0.945
CD34	SELP	ENSAMEP00000008666	ENSAMEP00000011989	CD34 molecule.	Selectin P.	0.705
CSN2	G1LGP8_AILME	ENSAMEP00000006049	ENSAMEP00000006088	Casein beta.	Uncharacterized protein.	0.661
CSN2	LALBA	ENSAMEP00000006049	ENSAMEP00000007751	Casein beta.	Lactalbumin alpha; Belongs to the glycosyl hydrolase 22 family.	0.948
CSN2	LOC100464677	ENSAMEP00000006049	ENSAMEP00000003500	Casein beta.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.704
CSN2	LOC100479931	ENSAMEP00000006049	ENSAMEP00000001155	Casein beta.	Uncharacterized protein.	0.846
EMCN	CD34	ENSAMEP00000009221	ENSAMEP00000008666	Uncharacterized protein.	CD34 molecule.	0.639
EMCN	LOC100479931	ENSAMEP00000009221	ENSAMEP00000001155	Uncharacterized protein.	Uncharacterized protein.	0.557
G1LGP8_AILME	CSN2	ENSAMEP00000006088	ENSAMEP00000006049	Uncharacterized protein.	Casein beta.	0.661
G1LGP8_AILME	LALBA	ENSAMEP00000006088	ENSAMEP00000007751	Uncharacterized protein.	Lactalbumin alpha; Belongs to the glycosyl hydrolase 22 family.	0.651
G1LGP8_AILME	LOC100464677	ENSAMEP00000006088	ENSAMEP00000003500	Uncharacterized protein.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.688
G1LGP8_AILME	LOC100479931	ENSAMEP00000006088	ENSAMEP00000001155	Uncharacterized protein.	Uncharacterized protein.	0.877
G1LGV4_AILME	CD34	ENSAMEP00000006144	ENSAMEP00000008666	Podocalyxin; Involved in the regulation of both adhesion and cell morphology and cancer progression. Function as an anti-adhesive molecule that maintains an open filtration pathway between neighboring foot processes in the podocyte by charge repulsion. Belongs to the podocalyxin family.	CD34 molecule.	0.434
G1LGV4_AILME	LOC100479931	ENSAMEP00000006144	ENSAMEP00000001155	Podocalyxin; Involved in the regulation of both adhesion and cell morphology and cancer progression. Function as an anti-adhesive molecule that maintains an open filtration pathway between neighboring foot processes in the podocyte by charge repulsion. Belongs to the podocalyxin family.	Uncharacterized protein.	0.604
G1LGV4_AILME	SELL	ENSAMEP00000006144	ENSAMEP00000011908	Podocalyxin; Involved in the regulation of both adhesion and cell morphology and cancer progression. Function as an anti-adhesive molecule that maintains an open filtration pathway between neighboring foot processes in the podocyte by charge repulsion. Belongs to the podocalyxin family.	Selectin L.	0.581
LALBA	CSN2	ENSAMEP00000007751	ENSAMEP00000006049	Lactalbumin alpha; Belongs to the glycosyl hydrolase 22 family.	Casein beta.	0.948