STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG7SPG7 matrix AAA peptidase subunit, paraplegin. (731 aa)    
Predicted Functional Partners:
MAIP1
Matrix AAA peptidase interacting protein 1.
    
 0.916
PHB
Prohibitin.
   
 0.870
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
  
 
0.831
PHB2
Prohibitin.
   
 0.801
PANDA_011596
Uncharacterized protein.
   
 0.801
SPG21
SPG21 abhydrolase domain containing, maspardin.
      
 0.755
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.753
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.743
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.738
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
  
 0.734
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.