Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A4Solute carrier family 1 member 4. (531 aa)    
Predicted Functional Partners:
SLC7A1
Solute carrier family 7 member 1.
   
 
 0.704
SLC3A2
Solute carrier family 3 member 2.
   
 
 0.609
SLC1A5
Amino acid transporter.
   
   0.595
SLC7A5
Solute carrier family 7 member 5.
   
 
 0.591
RHOH
Ras homolog family member H.
    
 0.585
MTR
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.573
PSPH
Phosphoserine phosphatase.
      
 0.568
CARS1
Cysteinyl-tRNA synthetase.
      
 0.555
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
      
 0.555
SLC6A14
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
 
 0.530
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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