Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAF1TNF receptor associated factor 1. (414 aa)    
Predicted Functional Partners:
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.958
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.957
TRADD
TNFRSF1A associated via death domain.
    
 0.957
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.955
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.953
TNFRSF1B
TNF receptor superfamily member 1B.
   
 0.950
MAP3K1
Mitogen-activated protein kinase kinase kinase 1.
   
 0.949
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.949
MAVS
Mitochondrial antiviral signaling protein.
    
 0.949
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.948
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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