STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF4Ras association domain family member 4. (321 aa)    
Predicted Functional Partners:
RASSF2
Ras association domain family member 2.
   
 
  0.980
STK3
Serine/threonine kinase 3.
   
 0.969
STK4
Serine/threonine kinase 4.
   
 0.928
EIF5B
Eukaryotic translation initiation factor 5B.
    
 
 0.859
RASSF5
Ras association domain family member 5.
    
 
 0.624
PLPBP
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6.
      
 0.567
FAM110B
Family with sequence similarity 110 member B.
      
 0.565
LRRC59
Leucine rich repeat containing 59.
      
 0.543
TRMT1L
tRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.505
RASSF1
Ras association domain family member 1.
    
 
 0.482
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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