STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF4Ras association domain family member 4. (321 aa)    
Predicted Functional Partners:
STK3
Serine/threonine kinase 3.
    
 0.950
RASSF2
Ras association domain family member 2.
  
  
 
0.901
PLPBP
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6.
      
 0.640
LRRC59
Leucine rich repeat containing 59.
      
 0.604
STK4
Serine/threonine kinase 4.
    
 0.529
SYVN1
Synoviolin 1.
      
 0.527
EPHX1
Epoxide hydrolase 1.
      
 0.526
CDA
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
   
  
 0.514
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
      
 0.497
EEF2K
Eukaryotic elongation factor 2 kinase.
      
 0.450
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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