STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX1DEAD-box helicase 1. (740 aa)    
Predicted Functional Partners:
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
   
 0.955
DHX36
DEAH-box helicase 36.
   
 0.943
RTRAF
RNA transcription, translation and transport factor.
   
 0.932
C2orf49
Chromosome 2 open reading frame 49.
    
 0.931
DDX21
DExD-box helicase 21.
  
 
0.876
FAM98A
Uncharacterized protein.
   
 
 0.858
G1LJ82_AILME
Uncharacterized protein.
   
 
 0.858
BPIFA1
BPI fold containing family A member 1.
    
 
 0.750
EIF2AK2
Eukaryotic translation initiation factor 2 alpha kinase 2.
     
 0.749
BST2
Uncharacterized protein.
      
 0.748
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.