STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX5T-box transcription factor 5. (517 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 
 0.966
WWTR1
WW domain containing transcription regulator 1.
    
 0.933
KAT2B
Lysine acetyltransferase 2B.
     
 0.913
YAP1
Yes associated protein 1.
    
 0.876
GATA4
GATA binding protein 4.
   
 
 0.766
HAND2
Heart and neural crest derivatives expressed 2.
   
 0.750
CTNNB1
Catenin beta 1.
    
 0.740
MEF2C
Myocyte enhancer factor 2C.
    
 
 0.728
MYOCD
Myocardin.
   
 
 0.687
VAX2
Ventral anterior homeobox 2.
    
 0.650
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.