STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf89Chromosome 6 open reading frame 89. (217 aa)    
Predicted Functional Partners:
G1L024_AILME
Uncharacterized protein.
 
     0.926
PTPN9
Protein tyrosine phosphatase non-receptor type 9.
      
 0.583
ABCD4
ATP binding cassette subfamily D member 4.
      
 0.493
PI16
Peptidase inhibitor 16.
 
    
 0.472
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
      
 0.448
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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