Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMA16Translation machinery associated 16 homolog. (202 aa)    
Predicted Functional Partners:
NOP53
NOP53 ribosome biogenesis factor.
   
   0.910
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.895
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.893
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.885
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.832
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.831
NSA2
NSA2 ribosome biogenesis factor.
   
 
 0.826
RRP15
Ribosomal RNA processing 15 homolog.
   
 
 0.821
RPF2
Ribosome production factor 2 homolog.
   
  
 0.815
G1LC61_AILME
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
   0.808
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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