LSM8 protein (Ailuropoda melanoleuca) - STRING interaction network

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LSM8

U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)

Predicted Functional Partners:

LSM7

0.999

LSM2

0.999

LSM5

0.999

LSM3

0.999

LSM4

0.999

LSM6

0.999

PRPF4

0.986

PRPF3

0.984

PRPF31

0.984

PRPF8

0.982

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM2	LSM3	ENSAMEP00000006823	ENSAMEP00000009877	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM2	LSM4	ENSAMEP00000006823	ENSAMEP00000011741	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM2	LSM5	ENSAMEP00000006823	ENSAMEP00000007053	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM2	LSM6	ENSAMEP00000006823	ENSAMEP00000017603	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM2	LSM7	ENSAMEP00000006823	ENSAMEP00000005782	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM2	LSM8	ENSAMEP00000006823	ENSAMEP00000001208	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM2	PRPF3	ENSAMEP00000006823	ENSAMEP00000001773	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 3.	0.984
LSM2	PRPF31	ENSAMEP00000006823	ENSAMEP00000004758	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 31.	0.976
LSM2	PRPF4	ENSAMEP00000006823	ENSAMEP00000013778	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 4.	0.972
LSM2	PRPF8	ENSAMEP00000006823	ENSAMEP00000008409	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 8.	0.969
LSM3	LSM2	ENSAMEP00000009877	ENSAMEP00000006823	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	LSM4	ENSAMEP00000009877	ENSAMEP00000011741	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
LSM3	LSM5	ENSAMEP00000009877	ENSAMEP00000007053	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM3	LSM6	ENSAMEP00000009877	ENSAMEP00000017603	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM3	LSM7	ENSAMEP00000009877	ENSAMEP00000005782	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM3	LSM8	ENSAMEP00000009877	ENSAMEP00000001208	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	PRPF3	ENSAMEP00000009877	ENSAMEP00000001773	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 3.	0.904
LSM3	PRPF31	ENSAMEP00000009877	ENSAMEP00000004758	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 31.	0.897
LSM3	PRPF4	ENSAMEP00000009877	ENSAMEP00000013778	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 4.	0.897
LSM3	PRPF8	ENSAMEP00000009877	ENSAMEP00000008409	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 8.	0.901

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