STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A1Solute carrier family 30 member 1. (505 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
    
 
 0.724
SLC11A2
Solute carrier family 11 member 2.
  
 
 0.674
SLC30A9
Solute carrier family 30 member 9.
  
 
 0.636
SLC39A13
Solute carrier family 39 member 13.
  
 0.616
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.603
SLC39A9
Solute carrier family 39 member 9.
   
 
 0.600
SLC39A1
Solute carrier family 39 member 1.
   
 
 0.595
SLC39A10
Solute carrier family 39 member 10.
  
 0.581
SLC35B3
Solute carrier family 35 member B3.
   
 
 0.575
SLC35C1
Solute carrier family 35 member C1.
   
  
 0.569
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.