STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE7Copine 7. (557 aa)    
Predicted Functional Partners:
FIGN
Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family.
     
 0.539
UTS2B
Urotensin 2B.
      
 0.521
ECRG4
ECRG4 augurin precursor.
      
 0.497
VSTM2B
V-set and transmembrane domain containing 2B.
   
  
 0.497
RNASEH2B
Ribonuclease H2 subunit B.
   
 
 0.472
LAMP5
Lysosomal associated membrane protein family member 5.
   
  
 0.462
STK32A
Serine/threonine kinase 32A; Belongs to the protein kinase superfamily.
   
  
 0.447
CCKAR
Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.441
SLC2A13
Solute carrier family 2 member 13; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.440
PPP1R1C
Protein phosphatase 1 regulatory inhibitor subunit 1C.
      
 0.439
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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