STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD32-oxoglutarate and iron dependent oxygenase domain containing 3. (315 aa)    
Predicted Functional Partners:
TDRKH
Tudor and KH domain containing.
      
 0.533
GNPNAT1
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.503
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
   
  
 0.462
MANBA
Mannosidase beta.
   
  
 0.457
LRRC17
Leucine rich repeat containing 17.
      
 0.457
GIGYF2
GRB10 interacting GYF protein 2.
      
 0.454
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.429
G1LY87_AILME
Uncharacterized protein.
      
 0.429
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.400
TICRR
TOPBP1 interacting checkpoint and replication regulator.
   
 0.400
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.