Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OGFOD32-oxoglutarate and iron dependent oxygenase domain containing 3. (315 aa)    
Predicted Functional Partners:
TMEM161A
Transmembrane protein 161A.
   
  
 0.778
TMEM53
Transmembrane protein 53.
      
 0.767
ZDHHC6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.767
VRK2
VRK serine/threonine kinase 2.
      
 0.767
PIGB
Mannosyltransferase.
      
 0.767
GPAT4
Glycerol-3-phosphate acyltransferase 4.
      
 0.737
TMEM214
Transmembrane protein 214.
   
  
 0.725
TMEM209
Transmembrane protein 209.
      
 0.715
HSD11B1
Hydroxysteroid 11-beta dehydrogenase 1.
      
 0.651
DNAJC16
DnaJ heat shock protein family (Hsp40) member C16.
    
 
 0.643
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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