STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A1APSolute carrier family 4 member 1 adaptor protein. (771 aa)    
Predicted Functional Partners:
PPP4R2
Protein phosphatase 4 regulatory subunit 2.
   
   0.813
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
   0.813
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
   0.808
OSGEP
O-sialoglycoprotein endopeptidase.
      
 0.742
PHF5A
PHD finger protein 5A.
    
 
 0.713
DNAJC8
DnaJ heat shock protein family (Hsp40) member C8.
    
   0.653
RBM11
RNA binding motif protein 11.
   
   0.602
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
   0.532
LOC100471390
Sm domain-containing protein.
    
   0.532
SNRPN
Small nuclear ribonucleoprotein-associated protein.
    
   0.513
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.