STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1L2Y6_AILMEUncharacterized protein. (59 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
   
    0.824
UBL5
Ubiquitin like 5.
   
    0.800
SUB1
SUB1 regulator of transcription.
   
    0.669
SNRPG
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
   
    0.663
POMP
Proteasome maturation protein.
   
    0.660
COX7A2
Cytochrome c oxidase subunit 7A2.
   
    0.578
COX7C
Cytochrome c oxidase subunit 7C.
   
    0.522
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
  
 0.490
LOC100471390
Sm domain-containing protein.
   
  
 0.490
NOP10
NOP10 ribonucleoprotein.
   
    0.461
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.