Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM33RNA binding motif protein 33. (1148 aa)    
Predicted Functional Partners:
RBM26
RNA binding motif protein 26.
   
  
 0.711
MTCL1
Microtubule crosslinking factor 1.
      
 0.690
THOC7
THO complex 7.
    
 
 0.690
IGBP1
Uncharacterized protein.
   
 
 0.689
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.656
FAM83C
Family with sequence similarity 83 member C.
      
 0.646
THOC1
THO complex 1.
    
 
 0.640
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 
 0.628
CPSF1
Cleavage and polyadenylation specific factor 1.
   
  
 0.605
UBN1
Ubinuclein 1.
   
  
 0.592
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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