STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INPP5BInositol polyphosphate-5-phosphatase B. (994 aa)    
Predicted Functional Partners:
PIK3C2B
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta; Belongs to the PI3/PI4-kinase family.
     
 0.957
OCRL
OCRL inositol polyphosphate-5-phosphatase.
  
 
 
0.947
PIK3C2A
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
     
 0.944
PIK3C2G
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma; Belongs to the PI3/PI4-kinase family.
     
 0.944
SYNJ1
Synaptojanin 1.
    
0.944
SACM1L
SAC1 like phosphatidylinositide phosphatase.
 
  
 0.933
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.932
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
     
 0.928
PTEN
Phosphatase and tensin homolog.
   
 
 0.920
INPP5E
Inositol polyphosphate-5-phosphatase E.
     
0.914
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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