Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFP1ZFP1 zinc finger protein. (408 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
  0.874
MAP3K20
Uncharacterized protein.
    
  0.809
TRIM33
Tripartite motif containing 33.
   
  0.702
CASZ1
Castor zinc finger 1.
    
 
 0.618
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
  0.610
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
  0.610
IPO7
Importin 7.
    
 
 0.600
TRIM24
Tripartite motif containing 24.
   
  0.593
IPO8
Importin 8.
    
 
 0.589
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.588
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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