STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR45BWD repeat domain 45B. (344 aa)    
Predicted Functional Partners:
C16orf70
Chromosome 16 open reading frame 70.
   
  
 0.758
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
0.719
RAB40C
RAB40C, member RAS oncogene family.
   
  
 0.717
ZFYVE1
Zinc finger FYVE-type containing 1.
    
 
 0.642
PEX1
Peroxisomal biogenesis factor 1.
    
 
 0.630
SGSM2
Small G protein signaling modulator 2.
      
 0.605
ATG2A
Autophagy related 2A.
    
 
 0.554
G1LKM9_AILME
BCAS3 domain-containing protein.
   
  
 0.548
LOC105239378
Uncharacterized protein.
   
  
 0.548
G1LQG5_AILME
Uncharacterized protein.
   
  
 0.548
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.