STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMA1LIM domain and actin binding 1. (772 aa)    
Predicted Functional Partners:
ANKRD54
Ankyrin repeat domain 54.
   
 
 0.622
TMLHE
Trimethyllysine hydroxylase, epsilon.
      
 0.542
STRBP
Spermatid perinuclear RNA binding protein.
      
 0.530
FRMPD3
FERM and PDZ domain containing 3.
      
 0.529
DYNLL2
Dynein light chain.
      
 0.527
MAEA
Macrophage erythroblast attacher.
      
 0.503
FBXL20
F-box and leucine rich repeat protein 20.
      
 0.479
MYH9
Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.475
TWF1
Twinfilin actin binding protein 1.
    
 
 0.475
CARD11
Caspase recruitment domain family member 11.
   
  
 0.468
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.