STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS9D1VPS9 domain containing 1. (629 aa)    
Predicted Functional Partners:
ASB3
Ankyrin repeat and SOCS box containing 3.
      
 0.750
PNO1
Partner of NOB1 homolog.
      
 0.750
ZNF276
Zinc finger protein 276.
      
 0.748
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.745
NR2F6
Nuclear receptor subfamily 2 group F member 6.
      
 0.729
CDHR3
Cadherin related family member 3.
      
 0.706
DND1
DND microRNA-mediated repression inhibitor 1.
      
 0.704
DBNDD1
Uncharacterized protein.
      
 0.698
DEF8
Differentially expressed in FDCP 8 homolog.
      
 0.618
MNS1
Meiosis specific nuclear structural 1.
      
 0.614
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.