STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSKCathepsin K; Belongs to the peptidase C1 family. (337 aa)    
Predicted Functional Partners:
TWF2
Uncharacterized protein.
     
 0.697
SERPINB13
Serpin family B member 13; Belongs to the serpin family.
   
 0.669
G1M9W3_AILME
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.669
DCSTAMP
Dendrocyte expressed seven transmembrane protein.
      
 0.656
NFATC1
Nuclear factor of activated T cells 1.
   
  
 0.654
CTSD
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.642
LAMP1
Lysosomal associated membrane protein 1.
   
 
 0.630
CSTA
Cystatin A.
   
 0.620
MMP13
Matrix metallopeptidase 13.
   
 
 0.617
LGMN
Legumain.
   
 
 0.614
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.