STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF276Zinc finger protein 276. (538 aa)    
Predicted Functional Partners:
CCNL1
Cyclin L1; Belongs to the cyclin family.
   
  
 0.657
NAIF1
Nuclear apoptosis inducing factor 1.
      
 0.630
DCLRE1B
5' exonuclease Apollo; 5'-3' exonuclease that plays a central role in telomere maintenance and protection during S-phase. Participates in the protection of telomeres against non-homologous end-joining (NHEJ)- mediated repair, thereby ensuring that telomeres do not fuse. Plays a key role in telomeric loop (T loop) formation by being recruited by TERF2 at the leading end telomeres and by processing leading-end telomeres immediately after their replication via its exonuclease activity: generates 3' single-stranded overhang at the leading end telomeres avoiding blunt leading-end telomeres [...]
    
 
 0.609
CCNL2
Cyclin L2; Belongs to the cyclin family.
   
  
 0.599
SPIRE2
Spire type actin nucleation factor 2.
    
 0.584
SRBD1
S1 RNA binding domain 1.
    
 
 0.573
DEF8
Differentially expressed in FDCP 8 homolog.
      
 0.566
VPS9D1
VPS9 domain containing 1.
      
 0.560
SAMD11
Sterile alpha motif domain containing 11.
    
 
 0.560
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.518
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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