STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH2A-2Laminin N-terminal domain-containing protein. (169 aa)    
Predicted Functional Partners:
USH2A
Usherin.
 
     0.881
PCDH15
Uncharacterized protein.
   
 
 0.682
LAMC1
Laminin subunit gamma 1.
   
 0.625
LAMC2
Laminin subunit gamma 2.
   
 0.625
LAMC3
Laminin subunit gamma 3.
   
 0.625
USH1C
USH1 protein network component harmonin.
    
 
 0.602
USH1G
USH1 protein network component sans.
   
 0.600
WHRN
Whirlin.
    
 
 0.587
CDH23
Cadherin related 23.
   
 
 0.560
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.558
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.