STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHKACholine kinase alpha. (400 aa)    
Predicted Functional Partners:
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.852
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
     
 0.784
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.753
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
     
 0.692
MLST8
MTOR associated protein, LST8 homolog.
   
 0.645
THEMIS2
Thymocyte selection associated family member 2.
      
 0.612
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
   
  
 0.602
LPIN1
Lipin 1.
     
 0.558
SMPDL3B
Acid sphingomyelinase-like phosphodiesterase.
      
 0.535
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
      
 0.529
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.