STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SF3A3Splicing factor 3a subunit 3. (501 aa)    
Predicted Functional Partners:
SF3A2
Splicing factor 3a subunit 2.
   
 0.999
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.998
SF3B3
Splicing factor 3b subunit 3.
   
 0.992
SF3A1
Uncharacterized protein.
   
 0.992
G1M8S4_AILME
Uncharacterized protein.
   
 0.989
RBM17
RNA binding motif protein 17.
   
 0.988
PHF5A
PHD finger protein 5A.
   
 0.988
SF3B2
Splicing factor 3b subunit 2.
   
 0.985
SF3B1
Splicing factor 3b subunit 1.
   
 0.983
SF3B4
Splicing factor 3b subunit 4.
   
 0.978
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.