STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP4La ribonucleoprotein domain family member 4. (720 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 
 0.676
PIP4K2C
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.
      
 0.607
TMBIM6
Transmembrane BAX inhibitor motif containing 6; Belongs to the BI1 family.
      
 0.602
MBTD1
Mbt domain containing 1.
      
 0.566
PBLD
Phenazine biosynthesis like protein domain containing.
      
 0.564
RRM1
Ribonucleotide reductase catalytic subunit M1.
   
  
 0.554
LATS1
Large tumor suppressor kinase 1.
      
 0.537
BUD13
BUD13 homolog.
      
 0.528
TACSTD2
Tumor associated calcium signal transducer 2.
      
 0.525
AGPAT5
1-acylglycerol-3-phosphate O-acyltransferase 5.
     
 0.522
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.