STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBCDTubulin folding cofactor D. (1167 aa)    
Predicted Functional Partners:
G1MCM9_AILME
CAP-Gly domain-containing protein.
    
 0.962
ARL2
ARL2-SNX15 readthrough (NMD candidate); Belongs to the small GTPase superfamily. Arf family.
    
 0.954
TBCB
Tubulin folding cofactor B.
    
 0.875
TBCC
Tubulin folding cofactor C.
    
 0.854
ARL13A
ADP ribosylation factor like GTPase 13A.
    
 0.845
TBCEL
Ubiquitin-like domain-containing protein.
      
 0.803
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.626
SMAP1
Small ArfGAP 1.
      
 0.609
MAD2L1
HORMA domain-containing protein.
    
   0.574
MAD1L1
Uncharacterized protein.
   
 
 0.570
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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