STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBCDTubulin folding cofactor D. (1167 aa)    
Predicted Functional Partners:
ARL2
ARL2-SNX15 readthrough (NMD candidate); Belongs to the small GTPase superfamily. Arf family.
    
 0.966
TBCC
Tubulin folding cofactor C.
    
 0.963
TBCB
Tubulin folding cofactor B.
    
 0.947
G1MCM9_AILME
CAP-Gly domain-containing protein.
    
 0.933
TBCA
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.851
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.818
MAD1L1
Uncharacterized protein.
   
 
 0.812
MAD2L1
HORMA domain-containing protein.
    
 
 0.795
ARL13A
ADP ribosylation factor like GTPase 13A.
    
 0.759
RP2
RP2 activator of ARL3 GTPase.
    
 0.722
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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