Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF25Transcription factor 25. (681 aa)    
Predicted Functional Partners:
NEMF
Nuclear export mediator factor.
   
 0.973
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 0.966
ERMN
Ermin.
   
 0.870
RPLP2
Ribosomal protein large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
    
 0.842
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
 0.840
BHLHB9
Arm_2 domain-containing protein.
    
   0.803
SATL1
N-acetyltransferase domain-containing protein.
    
   0.800
SAT1
Spermidine/spermine N1-acetyltransferase 1.
    
   0.800
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.789
RPS27A
Ubiquitin-like domain-containing protein.
   
  0.747
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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