Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LY6DLymphocyte antigen 6 family member D. (128 aa)    
Predicted Functional Partners:
MCOLN1
Mucolipin 1.
    
   0.580
LEAP2
Liver enriched antimicrobial peptide 2.
      
 0.550
EFHD2
Uncharacterized protein.
      
 0.520
KRT84
Keratin 84; Belongs to the intermediate filament family.
   
  
 0.506
ST14
Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix. Belongs to the peptidase S1 family.
      
 0.490
TRIM29
Tripartite motif containing 29.
   
  
 0.482
IL5
Interleukin-5; Factor that induces terminal differentiation of late- developing B-cells to immunoglobulin secreting cells.
  
     0.468
LRG1
Leucine rich alpha-2-glycoprotein 1.
      
 0.459
BPIFB2
BPI fold containing family B member 2.
      
 0.459
HAMP
Hepcidin antimicrobial peptide.
  
     0.458
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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