STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYNX1Ly6/neurotoxin 1. (114 aa)    
Predicted Functional Partners:
LY6H
Lymphocyte antigen 6 family member H.
      
 0.848
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
    
 
 0.758
SLURP1
Secreted LY6/PLAUR domain containing 1.
      
 0.749
GPRIN2
G protein regulated inducer of neurite outgrowth 2.
      
 0.725
DCLK3
Doublecortin like kinase 3.
      
 0.717
LYPD2
LY6/PLAUR domain containing 2.
      
 0.697
CHRNB2
Cholinergic receptor nicotinic beta 2 subunit.
    
 
 0.650
CHRNB4
Cholinergic receptor nicotinic beta 4 subunit.
    
 
 0.650
LYPD6
LY6/PLAUR domain containing 6.
      
 0.602
USP16
Ubiquitin carboxyl-terminal hydrolase 16; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes.
      
 0.544
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.