STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA45Spermatogenesis associated 45. (90 aa)    
Predicted Functional Partners:
TEX43
Testis expressed 43.
      
 0.746
TEX35
Testis expressed 35.
      
 0.746
SPEM1
Spermatid maturation 1.
      
 0.671
SPATA19
Spermatogenesis associated 19.
  
   
 0.632
CBY2
Spermatid associated.
      
 0.609
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.607
SPATA18
Spermatogenesis associated 18.
      
 0.526
CCDC182
Coiled-coil domain containing 182.
  
     0.450
ENDOD1
Endonuclease domain containing 1.
  
     0.413
KRTAP24-1
Keratin associated protein 24-1.
  
     0.401
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.